HYBRID-PARALLEL FORMULATION OF FUNDAMENTAL QUANTUM-CHEMICAL ALGORITHMS

Authors

  • Grzegorz Mazur Jagiellonian University
  • Marcin Makowski Jagiellonian University
  • Dawid Kuna AGH University of Science and Technology

DOI:

https://doi.org/10.7494/csci.2011.12.0.163

Keywords:

computational chemistry, parallelization

Abstract

Hybrid-parallel variants of Hartree-Fock, Kohn-Sham and Møller-Plesset second-level perturbationtheory are described. Their efficiency with respect to the serial and MPI-basedparallel implementations are measured and briefly analyzed. It is shown that while hybridparallelization provide increased efficiency in all cases, the magnitude of the effect stronglydepends on the features of the particular algorithm.

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Author Biographies

  • Grzegorz Mazur, Jagiellonian University
    Department of Computational Methods in Chemistry
  • Marcin Makowski, Jagiellonian University
    Department of Theoretical Chemistry
  • Dawid Kuna, AGH University of Science and Technology
    ACC CYFRONET AGH

References

IEEE Std 1003.1.

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Openmp application programming interface. http://www.openmp.org/drupal/mp-documents/spec25.pdf.

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Helgaker T., Jorgensen P., Olsen J.: Molecular Electronic Structure Theory. John Wiley and Sons, ltd., 2000.

Ishimura K., Kuramoto K., Ikuta Y., Hyodo S.: Mpi/openmp hybrid parallel algorithm for hartree-fock calculations. J. Chem. Th. Comp., 6, 2010, p. 1075.

Kohn W., Sham L. J.: Self-consistent equations including exchange and correlation effects. Phys. Rev. A, 140(4), 1965, pp. 1133-1138.

Mazur G., Makowski M.: Effective resource allocation in parallel quantumchemical calculations. Computing and Informatics, in press.

Mazur G., Makowski M.: Development and optimization of computational chemistry algorithms. Computing and Informatics, 28, 2009, pp. 115-125.

Roothaan C. C. J.: New developments in molecular orbital theory. Rev. Mod. Phys., 23, 1951, pp. 69-89.

Skylaris C.-K., Gagliardi L., Handy N. C., Ioannou A. G., Spencer S., Willetts A.: On the resolution of identity coulomb energy approximation in density functional theory. J. Mol. Struc. (Theochem), 501–502, 2000, pp. 229-239.

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Published

2013-03-10

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Section

Articles

How to Cite

Mazur, G., Makowski, M., & Kuna, D. (2013). HYBRID-PARALLEL FORMULATION OF FUNDAMENTAL QUANTUM-CHEMICAL ALGORITHMS. Computer Science, 12, 163. https://doi.org/10.7494/csci.2011.12.0.163

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